44 2033180199
All submissions of the EM system will be redirected to Online Manuscript Submission System. Authors are requested to submit articles directly to Online Manuscript Submission System of respective journal.
Current Research: Integrative Medicine

Sign up for email alert when new content gets added: Sign up

De novo transcriptome assembly for gene identification and molecular marker discovery in Capsicum annuum L. exposed at high-intensity UV-B irradiation

World Biotechnology Congress

July 16-17, 2018 Berlin, Germany

Luis Lightbourn, Luis Amarillas, Talia Martinez and Josefina Leon

Instituto de Investigacion Lightbourn, Mexico Centro de Investigacion en Alimentacion y Desarrollo, Mexico

ScientificTracks Abstracts: J Med Biotechnol

Abstract :

Statement of the Problem: Exposure to high-intensity UV-B irradiation induces the expression of many genes normally involved in defense, wounding, or general stress responses. However detailed processes of the linkage between light UV-B signaling and the up-regulation of gene expression remain unclear. Therefore, the mechanism by which UV-B stress triggers the intracellular defense signaling pathway remains poorly understood. Moreover, according to our knowledge, no studies have analyzed the overall changes in global gene expression in bell pepper leaves exposed to UV-B. Molecular biological analyses have allowed us to draw a picture of UV stress responses in plants, and determination of the transcriptome has had a significant impact on this research field.

Methodology & Theoretical Orientation: Deep sequencing, transcriptome assembly, and differential expression analysis were performed to investigate the regulatory mechanisms of Capsicum annuum in response to UV-B exposure. A global transcriptome analysis of the response to high-intensity UV-B irradiation was conducted and target genes regulated by UV-B were identified.

Findings: We conducted a high-throughput screening analysis. After 1 hour, 273 genes showed significantly different expression between control and treated plants, among these 111 were up-regulated and 162 were down-regulated; these were involved in several putative metabolic pathways related to biotic stress. After gene annotation and gene ontology enrichment analysis it was possible to determine that the UV-B radiation induced the expression of genes with functions in UV protection, including antioxidant enzymes, G proteins, primary and secondary metabolism and transcription factors.

Conclusion & Significance: Transcriptome profiling highlights possible signaling pathways and molecules for future research. These results opened ways of exploring the molecular mechanisms underlying the effects of UV-B irradiation on capsicum and have great implications for further studies.

Biography :

Luis Lightbourn is the President of the Instituto de Investigación Lightbourn, Mexico. He is an expert in plant biotechnology, genomics and cell biology and has over 30 years of experience in plant biochemistry and molecular biology. Throughout his research career he has focused on how light regulates plant growth and development. In particular, he has made a major contribution to understanding the molecular responses of plants to ultraviolet radiation. He has a range of expertise that has attracted invitations to contribute to a wide range of activities, including assessment of research strategy, industry consultation and government advice.

E-mail: lalr@bioteksa.com

 
Google Scholar citation report
Citations : 67

Current Research: Integrative Medicine received 67 citations as per Google Scholar report

Current Research: Integrative Medicine peer review process verified at publons
pulsus-health-tech
Top